STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422965_02366Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_000422965_02365
Unannotated protein.
 
     0.829
GCA_000422965_04179
Unannotated protein.
  
    0.728
GCA_000422965_04211
Unannotated protein.
  
   
 0.666
GCA_000422965_02364
Unannotated protein.
 
     0.658
GCA_000422965_04527
Unannotated protein.
  
     0.623
GCA_000422965_00898
Unannotated protein.
  
    0.611
GCA_000422965_03105
Unannotated protein.
  
     0.601
GCA_000422965_02600
Unannotated protein.
  
     0.597
GCA_000422965_01838
Unannotated protein.
  
     0.586
GCA_000422965_02482
Unannotated protein.
  
     0.579
Your Current Organism:
Pleomorphomonas oryzae
NCBI taxonomy Id: 1122963
Other names: P. oryzae DSM 16300, Pleomorphomonas oryzae DSM 16300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.