STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422965_04230Unannotated protein. (350 aa)    
Predicted Functional Partners:
GCA_000422965_04231
Unannotated protein.
  
  
 0.865
GCA_000422965_02587
Unannotated protein.
  
  
 0.841
GCA_000422965_02589
Unannotated protein.
   
    0.815
GCA_000422965_02588
Unannotated protein.
   
    0.803
GCA_000422965_04232
Unannotated protein.
     
 0.781
GCA_000422965_02556
Unannotated protein.
   
    0.776
GCA_000422965_03000
Unannotated protein.
  
    0.772
GCA_000422965_03183
Unannotated protein.
   
    0.758
GCA_000422965_01448
Unannotated protein.
   
    0.743
GCA_000422965_00008
Unannotated protein.
   
    0.730
Your Current Organism:
Pleomorphomonas oryzae
NCBI taxonomy Id: 1122963
Other names: P. oryzae DSM 16300, Pleomorphomonas oryzae DSM 16300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.