STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422985_01977Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000422985_00003
Unannotated protein.
 
 
 0.994
GCA_000422985_00434
Unannotated protein.
     
 0.863
GCA_000422985_00840
Unannotated protein.
     
 0.836
GCA_000422985_01978
Unannotated protein.
 
   
 0.835
GCA_000422985_01974
Unannotated protein.
     
 0.826
GCA_000422985_01979
Unannotated protein.
  
    0.802
GCA_000422985_01975
Unannotated protein.
       0.800
GCA_000422985_01976
Unannotated protein.
       0.800
GCA_000422985_01980
Unannotated protein.
       0.800
GCA_000422985_01981
Unannotated protein.
       0.800
Your Current Organism:
Porphyrobacter cryptus
NCBI taxonomy Id: 1122970
Other names: P. cryptus DSM 12079, Porphyrobacter cryptus DSM 12079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.