STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4P47_06060Unannotated protein. (144 aa)    
Predicted Functional Partners:
E4P47_06070
Unannotated protein.
 
     0.879
E4P47_06055
Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.796
E4P47_06065
Unannotated protein.
       0.768
ddl
Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.762
E4P47_05485
Unannotated protein.
  
     0.674
E4P47_05370
Unannotated protein.
  
     0.623
E4P47_05405
Unannotated protein.
  
     0.614
E4P47_06085
Unannotated protein.
 
     0.603
E4P47_01530
Unannotated protein.
  
     0.556
E4P47_06080
Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.550
Your Current Organism:
Porphyromonas levii
NCBI taxonomy Id: 1122973
Other names: P. levii DSM 23370, Porphyromonas levii ATCC 29147, Porphyromonas levii DSM 23370, Porphyromonas levii JCM 13866, Porphyromonas levii str. DSM 23370, Porphyromonas levii strain DSM 23370
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.