STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426585_00196Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000426585_00239
Unannotated protein.
 
 0.999
GCA_000426585_01507
Unannotated protein.
 
 
 0.989
GCA_000426585_00183
Unannotated protein.
 
  
 0.843
GCA_000426585_00197
Unannotated protein.
       0.839
GCA_000426585_00442
Unannotated protein.
 
 0.761
GCA_000426585_00195
Unannotated protein.
  
    0.743
GCA_000426585_00193
Unannotated protein.
    
 0.738
GCA_000426585_00194
Unannotated protein.
       0.697
GCA_000426585_00653
Unannotated protein.
  
  
 0.688
GCA_000426585_00321
Unannotated protein.
  
 0.633
Your Current Organism:
Prevotella baroniae
NCBI taxonomy Id: 1122980
Other names: P. baroniae DSM 16972 = JCM 13447, Prevotella baroniae DSM 16972, Prevotella baroniae DSM 16972 = JCM 13447, Prevotella baroniae JCM 13447, Prevotella baroniae JCM 13447 = DSM 16972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.