STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426585_00419Unannotated protein. (568 aa)    
Predicted Functional Partners:
GCA_000426585_00418
Unannotated protein.
 
    0.949
GCA_000426585_00417
Unannotated protein.
 
     0.948
GCA_000426585_00416
Unannotated protein.
 
    0.919
GCA_000426585_01400
Unannotated protein.
  
     0.686
GCA_000426585_00415
Unannotated protein.
 
     0.684
GCA_000426585_00414
Unannotated protein.
 
     0.680
GCA_000426585_00420
Unannotated protein.
 
     0.641
GCA_000426585_00413
Unannotated protein.
 
     0.554
GCA_000426585_02088
Unannotated protein.
   
 
 0.550
GCA_000426585_00421
Unannotated protein.
       0.490
Your Current Organism:
Prevotella baroniae
NCBI taxonomy Id: 1122980
Other names: P. baroniae DSM 16972 = JCM 13447, Prevotella baroniae DSM 16972, Prevotella baroniae DSM 16972 = JCM 13447, Prevotella baroniae JCM 13447, Prevotella baroniae JCM 13447 = DSM 16972
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.