STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000613605_00179Unannotated protein. (270 aa)    
Predicted Functional Partners:
GCA_000613605_01847
Unannotated protein.
   
 
 0.983
GCA_000613605_02189
Unannotated protein.
   
 0.895
GCA_000613605_00180
Unannotated protein.
 
 
 0.885
GCA_000613605_02017
Unannotated protein.
     
 0.844
GCA_000613605_01580
Unannotated protein.
   
 0.787
GCA_000613605_02664
Unannotated protein.
   
 0.787
GCA_000613605_02486
Unannotated protein.
  
 0.776
GCA_000613605_02161
Unannotated protein.
    
 0.703
GCA_000613605_01683
Unannotated protein.
    
  0.698
GCA_000613605_01340
Unannotated protein.
    
 0.690
Your Current Organism:
Prevotella paludivivens
NCBI taxonomy Id: 1122990
Other names: P. paludivivens DSM 17968 = JCM 13650, Prevotella paludivivens DSM 17968, Prevotella paludivivens DSM 17968 = JCM 13650, Prevotella paludivivens JCM 13650, Prevotella paludivivens JCM 13650 = DSM 17968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.