STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJ73_02286Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_000613445_00641
Unannotated protein.
 
     0.889
EJ73_02287
Unannotated protein.
 
     0.824
EJ73_02285
Unannotated protein.
 
    
0.814
EJ73_00224
Unannotated protein.
 
     0.774
EJ73_01396
Unannotated protein.
 
     0.770
GCA_000613445_03308
Unannotated protein.
 
     0.669
EJ73_00431
Unannotated protein.
  
     0.667
EJ73_00566
Unannotated protein.
  
     0.665
EJ73_01095
Unannotated protein.
  
     0.643
EJ73_00422
Unannotated protein.
  
     0.612
Your Current Organism:
Prevotella shahii
NCBI taxonomy Id: 1122991
Other names: P. shahii DSM 15611 = JCM 12083, Prevotella shahii DSM 15611, Prevotella shahii DSM 15611 = JCM 12083, Prevotella shahii JCM 12083, Prevotella shahii JCM 12083 = DSM 15611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.