STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ232_06035Unannotated protein. (174 aa)    
Predicted Functional Partners:
CJ232_06040
Unannotated protein.
  
    0.847
CJ232_06030
Unannotated protein.
  
    0.839
CJ232_06025
Unannotated protein.
       0.834
BFS16_03435
Unannotated protein.
       0.585
queE
Unannotated protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.430
BFS16_03405
Unannotated protein.
       0.423
Your Current Organism:
Prevotella timonensis
NCBI taxonomy Id: 1122992
Other names: P. timonensis 4401737 = DSM 22865 = JCM 15640, Prevotella sp. 4401737, Prevotella timonensis 4401737, Prevotella timonensis 4401737 = DSM 22865 = JCM 15640, Prevotella timonensis DSM 22865, Prevotella timonensis JCM 15640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.