STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423465_02938Unannotated protein. (365 aa)    
Predicted Functional Partners:
GCA_000423465_03244
Unannotated protein.
 
     0.954
GCA_000423465_02937
Unannotated protein.
 
 
  0.857
GCA_000423465_02936
Unannotated protein.
 
 
 0.850
GCA_000423465_02788
Unannotated protein.
   
  0.798
GCA_000423465_02933
Unannotated protein.
 
     0.763
GCA_000423465_00718
Unannotated protein.
   
 0.692
GCA_000423465_03229
Unannotated protein.
  
     0.677
GCA_000423465_02751
Unannotated protein.
   
 0.676
GCA_000423465_01582
Unannotated protein.
 
  
 0.668
GCA_000423465_02932
Unannotated protein.
 
     0.644
Your Current Organism:
Propionicicella superfundia
NCBI taxonomy Id: 1122999
Other names: P. superfundia DSM 22317, Propionicicella superfundia DSM 22317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.