STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423465_03133Unannotated protein. (532 aa)    
Predicted Functional Partners:
GCA_000423465_03134
Unannotated protein.
 
     0.950
GCA_000423465_03136
Unannotated protein.
 
     0.885
GCA_000423465_03137
Unannotated protein.
 
     0.884
GCA_000423465_03135
Unannotated protein.
 
     0.883
GCA_000423465_03138
Unannotated protein.
 
     0.865
GCA_000423465_02338
Unannotated protein.
  
     0.480
GCA_000423465_00165
Unannotated protein.
  
     0.414
Your Current Organism:
Propionicicella superfundia
NCBI taxonomy Id: 1122999
Other names: P. superfundia DSM 22317, Propionicicella superfundia DSM 22317
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.