STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380985_02239Unannotated protein. (804 aa)    
Predicted Functional Partners:
GCA_000380985_01233
Unannotated protein.
 
  
0.702
GCA_000380985_02791
Unannotated protein.
  
  
 0.689
XD92_1637
Unannotated protein.
  
    0.648
XD92_0077
Unannotated protein.
 
  
 0.648
GCA_000380985_01232
Unannotated protein.
  
  
 0.603
XD92_0079
Unannotated protein.
 
     0.594
GCA_000380985_01774
Unannotated protein.
  
  
 0.567
XD92_1345
Unannotated protein.
  
  
 0.561
GCA_000380985_00495
Unannotated protein.
  
  
 0.529
GCA_000380985_00678
Unannotated protein.
  
  
 0.529
Your Current Organism:
Proteiniphilum acetatigenes
NCBI taxonomy Id: 1123008
Other names: P. acetatigenes DSM 18083, Proteiniphilum acetatigenes DSM 18083
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