STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000380985_02620Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_000380985_02618
Unannotated protein.
 
 0.992
XD92_1328
Unannotated protein.
 
 0.991
XD92_0697
Unannotated protein.
 
 0.933
XD92_0698
Unannotated protein.
  
 0.895
GCA_000380985_02622
Unannotated protein.
    
  0.823
GCA_000380985_00547
Unannotated protein.
  
 
  0.639
GCA_000380985_02621
Unannotated protein.
 
     0.550
GCA_000380985_00600
Unannotated protein.
  
 
  0.508
GCA_000380985_00169
Unannotated protein.
  
     0.503
GCA_000380985_02617
Unannotated protein.
 
     0.439
Your Current Organism:
Proteiniphilum acetatigenes
NCBI taxonomy Id: 1123008
Other names: P. acetatigenes DSM 18083, Proteiniphilum acetatigenes DSM 18083
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.