STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423525_00194Unannotated protein. (812 aa)    
Predicted Functional Partners:
GCA_000423525_01320
Unannotated protein.
     
 0.757
GCA_000423525_01416
Unannotated protein.
     
 0.757
GCA_000423525_01383
Unannotated protein.
  
   
 0.694
GCA_000423525_01387
Unannotated protein.
  
 
 
 0.689
GCA_000423525_00876
Unannotated protein.
  
   
 0.681
GCA_000423525_00905
Unannotated protein.
  
   
 0.679
GCA_000423525_01797
Unannotated protein.
  
     0.642
GCA_000423525_00901
Unannotated protein.
 
 
0.632
GCA_000423525_00903
Unannotated protein.
  
     0.553
GCA_000423525_00802
Unannotated protein.
  
   
 0.519
Your Current Organism:
Proteocatella sphenisci
NCBI taxonomy Id: 1123009
Other names: P. sphenisci DSM 23131, Proteocatella sphenisci DSM 23131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.