STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423525_00689Unannotated protein. (374 aa)    
Predicted Functional Partners:
GCA_000423525_01749
Unannotated protein.
 
  
 0.811
GCA_000423525_02152
Unannotated protein.
   
 
 0.787
GCA_000423525_01029
Unannotated protein.
     
 0.624
GCA_000423525_00690
Unannotated protein.
       0.618
GCA_000423525_00275
Unannotated protein.
    
  0.597
GCA_000423525_00421
Unannotated protein.
     
 0.519
GCA_000423525_00819
Unannotated protein.
     
 0.519
GCA_000423525_00413
Unannotated protein.
  
 
 0.498
GCA_000423525_00688
Unannotated protein.
  
    0.475
GCA_000423525_00986
Unannotated protein.
  
 
 0.451
Your Current Organism:
Proteocatella sphenisci
NCBI taxonomy Id: 1123009
Other names: P. sphenisci DSM 23131, Proteocatella sphenisci DSM 23131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.