STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423525_00937Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000423525_00938
Unannotated protein.
 
     0.888
GCA_000423525_00939
Unannotated protein.
 
  
 0.876
GCA_000423525_00940
Unannotated protein.
 
     0.874
GCA_000423525_00936
Unannotated protein.
       0.773
GCA_000423525_00941
Unannotated protein.
 
     0.770
GCA_000423525_00943
Unannotated protein.
 
    0.700
GCA_000423525_01716
Unannotated protein.
 
  
 0.640
GCA_000423525_00619
Unannotated protein.
    
 0.571
GCA_000423525_01885
Unannotated protein.
  
 
   0.499
GCA_000423525_01421
Unannotated protein.
    
 0.436
Your Current Organism:
Proteocatella sphenisci
NCBI taxonomy Id: 1123009
Other names: P. sphenisci DSM 23131, Proteocatella sphenisci DSM 23131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.