STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423525_01553Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000423525_01973
Unannotated protein.
  
 
 0.918
GCA_000423525_01896
Unannotated protein.
  
 
 0.912
GCA_000423525_02108
Unannotated protein.
  
 
 0.912
GCA_000423525_01551
Unannotated protein.
     
 0.784
GCA_000423525_01552
Unannotated protein.
       0.773
GCA_000423525_01555
Unannotated protein.
 
     0.725
GCA_000423525_01554
Unannotated protein.
       0.686
GCA_000423525_01610
Unannotated protein.
     
 0.583
GCA_000423525_01550
Unannotated protein.
       0.541
GCA_000423525_01556
Unannotated protein.
       0.513
Your Current Organism:
Proteocatella sphenisci
NCBI taxonomy Id: 1123009
Other names: P. sphenisci DSM 23131, Proteocatella sphenisci DSM 23131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.