STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423505_00438Unannotated protein. (128 aa)    
Predicted Functional Partners:
GCA_000423505_01207
Unannotated protein.
  
     0.731
GCA_000423505_02039
Unannotated protein.
  
     0.728
GCA_000423505_00786
Unannotated protein.
  
     0.691
GCA_000423505_01112
Unannotated protein.
  
     0.677
GCA_000423505_01322
Unannotated protein.
  
     0.670
GCA_000423505_00013
Unannotated protein.
  
     0.667
GCA_000423505_00820
Unannotated protein.
  
    0.659
GCA_000423505_02028
Unannotated protein.
  
     0.655
GCA_000423505_00766
Unannotated protein.
  
     0.653
GCA_000423505_00440
Unannotated protein.
       0.651
Your Current Organism:
Pseudoclavibacter soli
NCBI taxonomy Id: 1123013
Other names: P. soli DSM 23366, Pseudoclavibacter soli DSM 23366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.