STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME93116.1Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1010 aa)    
Predicted Functional Partners:
SME93140.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.978
SMF37035.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.900
SMF48610.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.864
SMF40563.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.862
SME94751.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.844
SME94731.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.774
yajC
Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
 
 0.772
SMF40586.1
Outer membrane protein.
 
 0.771
SMF10950.1
Outer membrane protein, multidrug efflux system.
 
 0.764
SMF27642.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.753
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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