STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SME97629.1Type IV pilus assembly protein PilZ. (126 aa)    
Predicted Functional Partners:
SMF54746.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.999
SME92424.1
PAS domain S-box-containing protein.
    
   0.983
SME93494.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
SME94591.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
SME99631.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
SMF00948.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
SMF04224.1
Diguanylate cyclase/phosphodiesterase.
    
   0.983
SMF16726.1
Diguanylate cyclase/phosphodiesterase.
    
   0.983
SMF22558.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
SMF29811.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
   0.983
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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