STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF00712.1Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family. (268 aa)    
Predicted Functional Partners:
SMF00729.1
DNA-binding transcriptional regulator, MerR family.
 
     0.897
SMF38349.1
4-carboxymuconolactone decarboxylase.
  
  
  0.880
SMF09771.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.703
SMF09785.1
4-carboxymuconolactone decarboxylase.
  
  
 
0.590
SMF38425.1
4-carboxymuconolactone decarboxylase.
 
  
 
0.588
SMF01945.1
4-carboxymuconolactone decarboxylase.
 
  
 
0.583
SMF55289.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.580
SMF27695.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.459
SMF45413.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.459
SMF00734.1
ferredoxin--NADP+ reductase.
       0.457
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.