STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF02783.1Type IV pilus assembly protein PilX. (216 aa)    
Predicted Functional Partners:
SMF02795.1
Type IV pilus assembly protein PilW.
 
  
 0.987
SMF02776.1
Type IV pilus assembly protein PilY1.
 
  
 0.984
SMF02802.1
Type IV pilus assembly protein PilV.
 
  
 0.983
SMF02769.1
Type IV pilus assembly protein PilE.
 
  
 0.955
SMF42019.1
Type IV pilus assembly protein PilY1.
 
  
 0.861
SMF02807.1
Type IV fimbrial biogenesis protein FimT.
 
   
 0.857
SME94233.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.791
SMF41977.1
Type IV pilus assembly protein PilV.
  
  
 0.791
SMF41985.1
Type IV pilus assembly protein PilW.
  
  
 0.790
SME94183.1
Type IV pilus assembly protein PilE.
  
  
 0.750
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.