STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF07210.1Stage V sporulation protein R. (507 aa)    
Predicted Functional Partners:
SMF07247.1
Hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.997
SMF07261.1
Putative serine protein kinase, PrkA.
 
  
 0.996
SME99504.1
Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family.
   
    0.736
SMF33212.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.654
SME99497.1
Uncharacterized membrane protein YqjE.
   
    0.536
SMF45400.1
PhoH-like ATPase.
   
    0.499
SMF53733.1
PIN domain-containing protein.
   
    0.499
SME91759.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
   
  
 0.456
SMF17071.1
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase.
   
    0.455
SMF45573.1
BolA protein; Belongs to the BolA/IbaG family.
   
    0.440
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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