Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMF10163.1 | SMF11027.1 | SAMN02745746_01264 | SAMN02745746_01368 | Signal transduction histidine kinase. | Replication region DNA-binding N-term. | 0.759 |
SMF10163.1 | SMF11466.1 | SAMN02745746_01264 | SAMN02745746_01408 | Signal transduction histidine kinase. | HDOD domain-containing protein. | 0.473 |
SMF10163.1 | SMF29715.1 | SAMN02745746_01264 | SAMN02745746_02426 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SMF10163.1 | SMF41664.1 | SAMN02745746_01264 | SAMN02745746_03106 | Signal transduction histidine kinase. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.999 |
SMF10163.1 | SMF46414.1 | SAMN02745746_01264 | SAMN02745746_03413 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.992 |
SMF10163.1 | SMF46870.1 | SAMN02745746_01264 | SAMN02745746_03454 | Signal transduction histidine kinase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
SMF10163.1 | SMF58448.1 | SAMN02745746_01264 | SAMN02745746_04062 | Signal transduction histidine kinase. | Sensor domain CHASE3-containing protein. | 0.999 |
SMF11022.1 | SMF11027.1 | SAMN02745746_01367 | SAMN02745746_01368 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Replication region DNA-binding N-term. | 0.795 |
SMF11027.1 | SMF10163.1 | SAMN02745746_01368 | SAMN02745746_01264 | Replication region DNA-binding N-term. | Signal transduction histidine kinase. | 0.759 |
SMF11027.1 | SMF11022.1 | SAMN02745746_01368 | SAMN02745746_01367 | Replication region DNA-binding N-term. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.795 |
SMF11027.1 | SMF11466.1 | SAMN02745746_01368 | SAMN02745746_01408 | Replication region DNA-binding N-term. | HDOD domain-containing protein. | 0.701 |
SMF11027.1 | SMF20447.1 | SAMN02745746_01368 | SAMN02745746_01855 | Replication region DNA-binding N-term. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.887 |
SMF11027.1 | SMF29715.1 | SAMN02745746_01368 | SAMN02745746_02426 | Replication region DNA-binding N-term. | PAS domain S-box-containing protein. | 0.841 |
SMF11027.1 | SMF31077.1 | SAMN02745746_01368 | SAMN02745746_02484 | Replication region DNA-binding N-term. | Sporulation related domain-containing protein. | 0.744 |
SMF11027.1 | SMF41664.1 | SAMN02745746_01368 | SAMN02745746_03106 | Replication region DNA-binding N-term. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.837 |
SMF11027.1 | SMF46414.1 | SAMN02745746_01368 | SAMN02745746_03413 | Replication region DNA-binding N-term. | PAS domain S-box-containing protein. | 0.743 |
SMF11027.1 | SMF46870.1 | SAMN02745746_01368 | SAMN02745746_03454 | Replication region DNA-binding N-term. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.762 |
SMF11027.1 | SMF58448.1 | SAMN02745746_01368 | SAMN02745746_04062 | Replication region DNA-binding N-term. | Sensor domain CHASE3-containing protein. | 0.900 |
SMF11466.1 | SMF10163.1 | SAMN02745746_01408 | SAMN02745746_01264 | HDOD domain-containing protein. | Signal transduction histidine kinase. | 0.473 |
SMF11466.1 | SMF11027.1 | SAMN02745746_01408 | SAMN02745746_01368 | HDOD domain-containing protein. | Replication region DNA-binding N-term. | 0.701 |
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