STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF11406.1Gamma-glutamyl-gamma-aminobutyrate hydrolase. (252 aa)    
Predicted Functional Partners:
SMF00695.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.887
SMF11415.1
L-glutamine synthetase.
 
 
 0.855
SMF27482.1
Membrane dipeptidase.
      0.805
SMF11398.1
L-alanine dehydrogenase.
       0.762
SMF39755.1
Glutamine synthetase.
 
 
 0.676
SMF39692.1
Gamma-glutamylputrescine oxidase.
 
  
 0.659
SMF11420.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
  0.635
SMF05508.1
L-glutamine synthetase.
 
 
 0.633
SMF11391.1
Transcriptional regulator, XRE family with cupin sensor.
 
  
 0.628
SMF01092.1
Gamma-glutamylputrescine oxidase.
 
  
 0.608
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.