Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SME97485.1 | SMF13646.1 | SAMN02745746_00436 | SAMN02745746_01490 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.784 |
SME98523.1 | SMF13646.1 | SAMN02745746_00521 | SAMN02745746_01490 | Beta-barrel assembly machine subunit BamC. | Methyltransferase domain-containing protein. | 0.686 |
SME98523.1 | SMF31009.1 | SAMN02745746_00521 | SAMN02745746_02477 | Beta-barrel assembly machine subunit BamC. | Putative negative regulator of RcsB-dependent stress response. | 0.593 |
SME98523.1 | zapD | SAMN02745746_00521 | SAMN02745746_02871 | Beta-barrel assembly machine subunit BamC. | Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.545 |
SMF13646.1 | SME97485.1 | SAMN02745746_01490 | SAMN02745746_00436 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.784 |
SMF13646.1 | SME98523.1 | SAMN02745746_01490 | SAMN02745746_00521 | Methyltransferase domain-containing protein. | Beta-barrel assembly machine subunit BamC. | 0.686 |
SMF13646.1 | SMF13666.1 | SAMN02745746_01490 | SAMN02745746_01492 | Methyltransferase domain-containing protein. | Membrane-bound lytic murein transglycosylase D. | 0.713 |
SMF13646.1 | SMF29354.1 | SAMN02745746_01490 | SAMN02745746_02401 | Methyltransferase domain-containing protein. | YggT family protein. | 0.753 |
SMF13646.1 | SMF31009.1 | SAMN02745746_01490 | SAMN02745746_02477 | Methyltransferase domain-containing protein. | Putative negative regulator of RcsB-dependent stress response. | 0.741 |
SMF13646.1 | SMF45178.1 | SAMN02745746_01490 | SAMN02745746_03335 | Methyltransferase domain-containing protein. | TIGR02099 family protein. | 0.680 |
SMF13646.1 | dnaQ | SAMN02745746_01490 | SAMN02745746_01488 | Methyltransferase domain-containing protein. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.692 |
SMF13646.1 | ftsB | SAMN02745746_01490 | SAMN02745746_00635 | Methyltransferase domain-containing protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.676 |
SMF13646.1 | rnhA | SAMN02745746_01490 | SAMN02745746_01489 | Methyltransferase domain-containing protein. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.906 |
SMF13646.1 | zapD | SAMN02745746_01490 | SAMN02745746_02871 | Methyltransferase domain-containing protein. | Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.729 |
SMF13666.1 | SMF13646.1 | SAMN02745746_01492 | SAMN02745746_01490 | Membrane-bound lytic murein transglycosylase D. | Methyltransferase domain-containing protein. | 0.713 |
SMF13666.1 | dnaQ | SAMN02745746_01492 | SAMN02745746_01488 | Membrane-bound lytic murein transglycosylase D. | DNA polymerase-3 subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.442 |
SMF13666.1 | rnhA | SAMN02745746_01492 | SAMN02745746_01489 | Membrane-bound lytic murein transglycosylase D. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.535 |
SMF29354.1 | SMF13646.1 | SAMN02745746_02401 | SAMN02745746_01490 | YggT family protein. | Methyltransferase domain-containing protein. | 0.753 |
SMF29354.1 | SMF31009.1 | SAMN02745746_02401 | SAMN02745746_02477 | YggT family protein. | Putative negative regulator of RcsB-dependent stress response. | 0.628 |
SMF29354.1 | SMF45178.1 | SAMN02745746_02401 | SAMN02745746_03335 | YggT family protein. | TIGR02099 family protein. | 0.603 |
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