STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF17298.1HDIG domain-containing protein. (708 aa)    
Predicted Functional Partners:
SMF01077.1
PAS domain S-box-containing protein.
 
 
 0.997
SMF31636.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.995
SMF29715.1
PAS domain S-box-containing protein.
 
 
 0.994
SMF58448.1
Sensor domain CHASE3-containing protein.
   
 0.994
SMF10163.1
Signal transduction histidine kinase.
   
 0.993
SMF17315.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.991
SMF22532.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.960
SMF55337.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
  
 0.960
SMF49482.1
Signal transduction histidine kinase.
 
 
 0.945
SMF54746.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.927
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.