STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF19370.1Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (126 aa)    
Predicted Functional Partners:
SMF09771.1
3-carboxy-cis,cis-muconate cycloisomerase.
  
 
 0.671
SMF01455.1
Hemolysin-type calcium-binding repeat-containing protein.
   
    0.644
SMF27464.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
  
 0.601
SME99069.1
Uncharacterized membrane protein.
   
    0.577
SME99076.1
Uncharacterized membrane protein.
   
    0.577
SME99060.1
Hypothetical protein; Belongs to the UPF0276 family.
   
  
 0.557
SMF23150.1
Hypothetical protein; Belongs to the UPF0276 family.
   
  
 0.557
SMF32493.1
Hypothetical protein.
   
  
 0.557
SMF47581.1
Hypothetical protein.
   
  
 0.557
SMF09779.1
3-oxoadipate enol-lactonase.
    
  0.555
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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