STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF26518.1C4-dicarboxylate-binding protein DctP. (331 aa)    
Predicted Functional Partners:
SMF26492.1
C4-dicarboxylate transporter, DctM subunit.
 
 0.994
SMF26500.1
C4-dicarboxylate transporter, DctQ subunit.
 
  
 0.959
SMF56190.1
C4-dicarboxylate transporter, DctQ subunit.
 
  
 0.911
SMF56181.1
C4-dicarboxylate transporter, DctM subunit.
  
 0.882
SMF26528.1
(S)-citramalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
  
    0.707
SMF26541.1
Itaconate CoA-transferase; Belongs to the CoA-transferase III family.
  
    0.634
SMF26557.1
acyl-CoA dehydrogenase.
       0.619
SMF10465.1
C4-dicarboxylate-binding protein DctP.
  
  
 
0.587
SMF24516.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
   
  0.567
SMF10321.1
TRAP transporter, DctM subunit.
   
 0.543
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.