STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF27382.1Fe-S oxidoreductase. (633 aa)    
Predicted Functional Partners:
SMF27395.1
V4R domain-containing protein.
 
    0.983
SMF27388.1
2,4-dienoyl-CoA reductase.
 
 
 0.969
SMF27331.1
Ferredoxin-NADP reductase.
 
  
 0.968
SMF27342.1
Electron transfer flavoprotein beta subunit.
 
  
 0.965
SMF27507.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 
 0.942
SMF27338.1
Rieske 2Fe-2S family protein.
 
  
 0.937
SMF27377.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
  
 0.888
SMF19430.1
L-lactate dehydrogenase complex protein LldF.
 
 0.874
SMF00695.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.859
SMF27482.1
Membrane dipeptidase.
 
    0.837
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.