STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF30819.1Type II secretion system protein G (GspG). (136 aa)    
Predicted Functional Partners:
SMF30875.1
General secretion pathway protein E.
 
 0.982
SMF30882.1
General secretion pathway protein F.
 
  
 0.957
SMF37960.1
Type IV pilus assembly protein PilB.
 
 0.940
SME94202.1
Type IV pilin N-term methylation site GFxxxE.
  
 0.938
SMF30837.1
General secretion pathway protein D; Belongs to the bacterial secretin family.
   
 0.908
SMF30828.1
General secretion pathway protein G.
 
  
 
0.905
SMF30893.1
General secretion pathway protein G.
 
  
 
0.898
SMF37951.1
Type IV pilus assembly protein PilC.
 
  
 0.858
SMF30809.1
Type II secretory pathway, pseudopilin PulG.
 
    
0.855
SMF37942.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.772
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.