STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF45413.1Pimeloyl-ACP methyl ester carboxylesterase. (277 aa)    
Predicted Functional Partners:
SMF45400.1
PhoH-like ATPase.
       0.776
SMF25774.1
Acyl carrier protein.
   
 0.732
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.729
SMF25891.1
Hypothetical protein.
   
 0.729
SMF49325.1
Acyl carrier protein.
   
 0.729
SMF49645.1
Chorismate mutase.
     
 0.691
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  0.657
SMF45389.1
Peroxiredoxin Q/BCP.
  
  
 0.611
SMF18041.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.608
SMF09673.1
Amino acid adenylation domain-containing protein.
    
 0.605
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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