STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF57372.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
SMF48076.1
LysR substrate binding domain-containing protein.
  
     0.717
SMF38558.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.655
SMF15712.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.628
SMF09838.1
Pca operon transcription factor PcaQ; Belongs to the LysR transcriptional regulatory family.
  
     0.607
SMF57337.1
MFS transporter, DHA1 family, arabinose polymer transporter.
 
     0.604
SMF06671.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.591
SMF14511.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.580
SMF57365.1
Hypothetical protein.
       0.547
SMF57353.1
Luciferase-type oxidoreductase, BA3436 family.
 
     0.543
SMF42654.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.483
Your Current Organism:
Pseudogulbenkiania subflava
NCBI taxonomy Id: 1123014
Other names: P. subflava DSM 22618, Pseudogulbenkiania subflava BP-5, Pseudogulbenkiania subflava DSM 22618, beta proteobacterium KMU-BP-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.