STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423545_01728Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000423545_00938
Unannotated protein.
   
 0.940
GCA_000423545_01089
Unannotated protein.
  
 
 0.932
GCA_000423545_00846
Unannotated protein.
 
   0.927
GCA_000423545_03401
Unannotated protein.
    
 0.927
GCA_000423545_04941
Unannotated protein.
    
 0.927
GCA_000423545_01205
Unannotated protein.
 
   0.891
GCA_000423545_01206
Unannotated protein.
 
   0.885
GCA_000423545_04168
Unannotated protein.
   
 0.867
GCA_000423545_00465
Unannotated protein.
   
 0.863
GCA_000423545_01949
Unannotated protein.
   
 0.863
Your Current Organism:
Pseudomonas resinovorans DSM 21078
NCBI taxonomy Id: 1123020
Other names: P. resinovorans DSM 21078
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.