STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620785_01938Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_000620785_01939
Unannotated protein.
 
 0.966
GCA_000620785_03708
Unannotated protein.
 
 0.879
GCA_000620785_04308
Unannotated protein.
 
 0.879
GCA_000620785_03806
Unannotated protein.
 
 0.874
GCA_000620785_01628
Unannotated protein.
 
 0.862
GCA_000620785_03483
Unannotated protein.
 
 0.857
GCA_000620785_06523
Unannotated protein.
 
 0.856
GCA_000620785_08718
Unannotated protein.
 
 0.853
GCA_000620785_01985
Unannotated protein.
 
 0.852
GCA_000620785_07201
Unannotated protein.
 
 0.852
Your Current Organism:
Pseudonocardia acaciae
NCBI taxonomy Id: 1123023
Other names: P. acaciae DSM 45401, Pseudonocardia acaciae DSM 45401, Pseudonocardia acaciae GMKU095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.