STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620785_03317Unannotated protein. (680 aa)    
Predicted Functional Partners:
GCA_000620785_07084
Unannotated protein.
  
 0.782
GCA_000620785_03313
Unannotated protein.
       0.781
GCA_000620785_03314
Unannotated protein.
       0.780
GCA_000620785_03316
Unannotated protein.
       0.779
GCA_000620785_09479
Unannotated protein.
  
     0.774
GCA_000620785_03315
Unannotated protein.
       0.773
GCA_000620785_02461
Unannotated protein.
 
 
  0.712
GCA_000620785_02650
Unannotated protein.
   
 0.704
GCA_000620785_00478
Unannotated protein.
    
  0.681
GCA_000620785_07083
Unannotated protein.
    
 0.661
Your Current Organism:
Pseudonocardia acaciae
NCBI taxonomy Id: 1123023
Other names: P. acaciae DSM 45401, Pseudonocardia acaciae DSM 45401, Pseudonocardia acaciae GMKU095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.