STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620785_04405Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000620785_03899
Unannotated protein.
  
     0.758
GCA_000620785_07516
Unannotated protein.
  
    0.587
GCA_000620785_04404
Unannotated protein.
       0.558
GCA_000620785_08552
Unannotated protein.
   
    0.528
GCA_000620785_04755
Unannotated protein.
   
    0.517
GCA_000620785_02922
Unannotated protein.
   
    0.515
GCA_000620785_06138
Unannotated protein.
   
    0.515
GCA_000620785_06877
Unannotated protein.
   
    0.515
GCA_000620785_07633
Unannotated protein.
   
    0.507
GCA_000620785_08395
Unannotated protein.
   
    0.507
Your Current Organism:
Pseudonocardia acaciae
NCBI taxonomy Id: 1123023
Other names: P. acaciae DSM 45401, Pseudonocardia acaciae DSM 45401, Pseudonocardia acaciae GMKU095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.