STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620785_07040Unannotated protein. (752 aa)    
Predicted Functional Partners:
GCA_000620785_07041
Unannotated protein.
   
   0.881
GCA_000620785_05324
Unannotated protein.
    
  0.663
GCA_000620785_00431
Unannotated protein.
     
 0.652
GCA_000620785_08660
Unannotated protein.
    
  0.651
GCA_000620785_07039
Unannotated protein.
       0.565
GCA_000620785_00781
Unannotated protein.
   
   0.510
GCA_000620785_01566
Unannotated protein.
   
   0.510
GCA_000620785_02332
Unannotated protein.
   
   0.510
GCA_000620785_02443
Unannotated protein.
   
   0.510
GCA_000620785_04037
Unannotated protein.
   
   0.510
Your Current Organism:
Pseudonocardia acaciae
NCBI taxonomy Id: 1123023
Other names: P. acaciae DSM 45401, Pseudonocardia acaciae DSM 45401, Pseudonocardia acaciae GMKU095
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.