STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620785_07742Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000620785_07743
Unannotated protein.
 
  
 0.949
GCA_000620785_07741
Unannotated protein.
 
 0.944
GCA_000620785_06991
Unannotated protein.
  
 0.693
GCA_000620785_07740
Unannotated protein.
       0.590
GCA_000620785_04556
Unannotated protein.
  
     0.555
GCA_000620785_07744
Unannotated protein.
       0.551
GCA_000620785_02208
Unannotated protein.
    
  0.547
GCA_000620785_09123
Unannotated protein.
   
    0.520
GCA_000620785_09343
Unannotated protein.
   
    0.520
GCA_000620785_04701
Unannotated protein.
 
    0.513
Your Current Organism:
Pseudonocardia acaciae
NCBI taxonomy Id: 1123023
Other names: P. acaciae DSM 45401, Pseudonocardia acaciae DSM 45401, Pseudonocardia acaciae GMKU095
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.