STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429025_00752Unannotated protein. (823 aa)    
Predicted Functional Partners:
GCA_000429025_05373
Unannotated protein.
 
    0.793
GCA_000429025_05401
Unannotated protein.
 
    0.587
GCA_000429025_07500
Unannotated protein.
  
    0.565
GCA_000429025_08374
Unannotated protein.
  
    0.563
GCA_000429025_00751
Unannotated protein.
       0.548
GCA_000429025_07535
Unannotated protein.
 
  
 0.545
GCA_000429025_00753
Unannotated protein.
       0.517
GCA_000429025_06855
Unannotated protein.
 
  
 0.501
GCA_000429025_00690
Unannotated protein.
   
    0.495
GCA_000429025_05383
Unannotated protein.
 
    0.453
Your Current Organism:
Pseudonocardia spinosispora
NCBI taxonomy Id: 1123025
Other names: P. spinosispora DSM 44797, Pseudonocardia spinosispora DSM 44797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.