STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429025_04424Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_000429025_03232
Unannotated protein.
  
   
 0.794
GCA_000429025_03964
Unannotated protein.
  
     0.773
GCA_000429025_07384
Unannotated protein.
  
     0.754
GCA_000429025_07248
Unannotated protein.
  
     0.749
GCA_000429025_05857
Unannotated protein.
  
     0.746
GCA_000429025_05801
Unannotated protein.
  
     0.742
GCA_000429025_06357
Unannotated protein.
  
     0.741
GCA_000429025_04918
Unannotated protein.
 
     0.739
GCA_000429025_03554
Unannotated protein.
  
     0.735
GCA_000429025_07329
Unannotated protein.
  
     0.733
Your Current Organism:
Pseudonocardia spinosispora
NCBI taxonomy Id: 1123025
Other names: P. spinosispora DSM 44797, Pseudonocardia spinosispora DSM 44797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.