STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429025_06019Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_000429025_06018
Unannotated protein.
 
 0.990
GCA_000429025_06717
Unannotated protein.
  
 0.985
GCA_000429025_08061
Unannotated protein.
 
 0.964
GCA_000429025_08216
Unannotated protein.
 
 0.964
GCA_000429025_05568
Unannotated protein.
 
 0.884
GCA_000429025_02856
Unannotated protein.
  
 0.882
GCA_000429025_03941
Unannotated protein.
  
 0.882
GCA_000429025_05315
Unannotated protein.
  
 0.882
GCA_000429025_05613
Unannotated protein.
  
 0.882
GCA_000429025_05632
Unannotated protein.
  
 0.882
Your Current Organism:
Pseudonocardia spinosispora
NCBI taxonomy Id: 1123025
Other names: P. spinosispora DSM 44797, Pseudonocardia spinosispora DSM 44797
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.