STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcAcetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (246 aa)    
Predicted Functional Partners:
SHO62904.1
NTE family protein.
 
   
 0.874
SHO66514.1
3-oxoacid CoA-transferase subunit A.
    
 0.691
SHO66513.1
3-oxoacid CoA-transferase subunit B.
    
 0.667
SHO67156.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.619
SHO67454.1
Glutaconate CoA-transferase subunit A.
    
 0.554
SHO67453.1
Glutaconate CoA-transferase subunit B.
    
 0.519
SHO63579.1
Fusaric acid resistance protein-like.
  
     0.442
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
  
    0.437
SHO63627.1
NitT/TauT family transport system permease protein.
  
     0.435
SHO62910.1
Phosphate ABC transporter substrate-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
       0.427
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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