STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO64253.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
SHO64256.1
Ferredoxin-NADP reductase.
 
   
 0.948
SHO64259.1
Protein of unknown function.
 
     0.943
SHO67224.1
N-methylglutamate synthase subunit A.
  
     0.767
SHO67225.1
N-methylglutamate synthase subunit B.
  
     0.764
SHO67226.1
N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family.
  
     0.763
SHO59878.1
Transcriptional regulator, XRE family with cupin sensor.
  
     0.713
SHO64251.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.705
SHO67227.1
Glutamine synthetase.
  
     0.657
SHO64262.1
Hypothetical protein.
       0.529
SHO64248.1
Ribose transport system substrate-binding protein.
       0.499
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.