STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO64427.1Glycosyltransferase, MGT family. (428 aa)    
Predicted Functional Partners:
SHO66749.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
  
 0.945
SHO64451.1
Hypothetical protein.
     0.833
SHO64448.1
Hypothetical protein.
     0.827
SHO64430.1
DNA-binding transcriptional regulator, GntR family.
 
     0.792
SHO64457.1
Acyl-CoA reductase.
 
     0.635
SHO64433.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
     0.583
SHO66713.1
2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase.
  
  
  0.541
SHO66701.1
Polyketide cyclase / dehydrase and lipid transport.
 
 
  0.526
SHO65746.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.454
SHO67454.1
Glutaconate CoA-transferase subunit A.
  
     0.429
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.