STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO65431.1Filamentous hemagglutinin family N-terminal domain-containing protein. (1850 aa)    
Predicted Functional Partners:
SHO65433.1
Hemolysin activation/secretion protein.
 
 0.876
SHO67271.1
Chitinase.
 
 
 0.759
SHO60343.1
Fibronectin type III domain-containing protein.
  
  
  0.712
SHO65768.1
Hypothetical protein.
  
  
  0.705
SHO64076.1
Autotransporter-associated beta strand repeat-containing protein.
  
  
  0.678
SHO65927.1
Autotransporter-associated beta strand repeat-containing protein.
  
  
  0.677
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.647
SHO66671.1
Autotransporter-associated beta strand repeat-containing protein.
  
  
  0.631
SHO67656.1
Autotransporter-associated beta strand repeat-containing protein.
  
  
  0.616
SHO67720.1
Autotransporter-associated beta strand repeat-containing protein.
 
 
 0.593
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.