STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO65463.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)    
Predicted Functional Partners:
SHO65464.1
Ribose transport system substrate-binding protein.
  0.895
SHO65462.1
Simple sugar transport system ATP-binding protein.
  0.882
SHO66663.1
Ribose transport system substrate-binding protein.
 
  0.755
SHO65757.1
Ribose transport system substrate-binding protein.
 
  0.733
SHO66557.1
Ribose transport system substrate-binding protein.
 
  0.731
rbsA-4
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.709
SHO64242.1
Fructose transport system ATP-binding protein.
  0.677
SHO67194.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
  0.676
SHO61709.1
Simple sugar transport system substrate-binding protein.
 
  0.651
SHO65625.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
  0.651
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.