STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO65753.1Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (499 aa)    
Predicted Functional Partners:
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
  0.901
SHO64192.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
0.824
SHO59947.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.783
SHO66749.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
   
 
 0.641
SHO60575.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.617
SHO61092.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.613
SHO64087.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.613
SHO65755.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.603
SHO65754.1
Choline dehydrogenase.
 
 
  0.597
SHO65207.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
     
 0.584
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.