STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO66331.1Transcriptional regulator, IclR family. (260 aa)    
Predicted Functional Partners:
SHO66644.1
Transcriptional regulator, IclR family.
  
     0.775
SHO67686.1
Transcriptional regulator, IclR family.
  
     0.775
SHO66752.1
Transcriptional regulator, IclR family.
  
     0.774
SHO67455.1
Transcriptional regulator, IclR family.
  
     0.774
SHO60442.1
Transcriptional regulator, IclR family.
  
     0.773
SHO66330.1
Polar amino acid transport system substrate-binding protein.
 
     0.664
SHO66937.1
Transcriptional regulator, IclR family.
  
     0.629
SHO66325.1
L-seryl-tRNA(Ser) seleniumtransferase.
 
     0.503
SHO67708.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.474
SHO67709.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
  
    0.458
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.