STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO66485.1Ribose transport system substrate-binding protein. (316 aa)    
Predicted Functional Partners:
SHO66439.1
PAS domain S-box-containing protein.
   
 0.983
SHO63020.1
Na+/proline symporter.
   
 0.961
SHO67053.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
    
 0.961
SHO67543.1
Signal transduction histidine kinase.
    
 0.933
SHO66484.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.921
SHO65574.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.826
SHO66483.1
Ribose transport system ATP-binding protein.
 
  0.741
SHO66588.1
Ribose transport system substrate-binding protein.
  
  
  0.679
SHO65596.1
Ribose transport system substrate-binding protein.
  
     0.593
SHO63188.1
Two-component system, chemotaxis family, sensor kinase CheA.
    
 0.566
Your Current Organism:
Pseudoxanthobacter soli
NCBI taxonomy Id: 1123029
Other names: P. soli DSM 19599, Pseudoxanthobacter soli DSM 19599
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.